Columnaris disease is one of the most common and deadly bacterial infections in freshwater aquariums. Caused by the bacterium Flavobacterium columnare, it spreads rapidly and can wipe out entire fish populations if not addressed in time. Often confused with fungal infections, Columnaris presents with distinct symptoms that aquarists must recognize early to save their fish.
This comprehensive guide explains Columnaris symptoms in fish, its progression, how to identify it correctly, and what to do when you notice the warning signs.
What is Columnaris Disease?
Columnaris is a bacterial infection that targets the skin, fins, gills, and mouth of freshwater fish. It is not a fungus, despite producing white, cottony patches that resemble fungal infections.
Key Facts:
- Cause: Flavobacterium columnare
- Type: Gram-negative bacterial infection
- Spread: Highly contagious (water, nets, fish-to-fish contact)
- Forms: External (visible on skin/mouth/fins) and internal (affecting organs and gills)
- Onset: Can be acute (fast and deadly) or chronic (slow and progressive)
Recognizing symptoms early is the first step in successful treatment.
Early Symptoms of Columnaris in Fish

Like most bacterial infections, Columnaris starts with mild symptoms that worsen over time. Spotting these signs early greatly improves the survival chances of your fish.
1. White or Grayish Patches
- Flat, spreading lesions on the skin
- May look like fungus but are thinner and smoother
- Often appear on the head, mouth, or near fins
2. Cotton Mouth Appearance
- White, cotton-like growths around the lips
- Unlike fungus, these growths are not fluffy but more film-like
- Advanced cases lead to erosion of the mouth tissue
3. Saddleback Lesion
- A distinctive pale patch across the back behind the dorsal fin
- Resembles a “saddle” marking
- This is one of the most diagnostic signs of Columnaris
4. Frayed or Eroding Fins
- Fins look ragged, torn, or “melting away”
- Similar to fin rot but progresses faster
- Often accompanied by white edges on fins
5. Changes in Skin Texture
- Slimy or cloudy appearance on scales
- Discoloration (fish look pale or blotchy)
- Lesions may ulcerate, leading to open wounds
Advanced Symptoms of Columnaris
When left untreated, Columnaris symptoms worsen, often leading to severe internal and external damage.
1. Gill Damage
- Gills become pale or discolored
- Rapid or labored breathing (gasping at surface)
- Fish suffocate due to gill necrosis
2. Deep Ulcers
- Open sores form where lesions spread
- Secondary infections (fungal or parasitic) develop
- Skin sloughing off in severe cases
3. Lethargy and Weakness
- Fish isolate themselves
- Rest at the bottom or near the surface
- Reduced swimming activity
4. Loss of Appetite
- Fish refuse food
- Leads to rapid weight loss and weakness
5. Sudden Death
- In acute infections, fish may die within 24–48 hours
- Sometimes without visible external symptoms
Columnaris Symptoms in Specific Areas
To make identification clearer, here are localized symptoms depending on where the infection strikes:
Columnaris in the Mouth (Cotton Mouth Disease)
- White patches around lips
- Mouth erosion (fish unable to eat)
- Cotton-like film covering jaws
Columnaris on the Body (Saddleback Disease)
- White-gray lesion across the back near the dorsal fin
- Spreads quickly across body surface
- Causes scale loss and ulcers
Columnaris in the Fins
- White or pale edges on fins
- Severe fraying and rot-like symptoms
- Complete fin loss in advanced stages
Columnaris in the Gills
- Pale, discolored gills
- Rapid gill movement (labored breathing)
- Suffocation due to tissue necrosis
Columnaris Symptoms vs Fungal Infections

Many aquarists confuse Columnaris with fungus. Here’s how to tell them apart:
Feature | Columnaris (Bacterial) | Fungus (True Fungal) |
---|---|---|
Appearance | Flat, white-gray patches | Fluffy, cotton-like tufts |
Progression | Fast, deadly in 1–2 days | Slower, develops over days to weeks |
Lesions | Accompanied by ulcers, saddleback marks | Usually external, no deep ulcers |
Response to Treatment | Requires antibiotics | Responds to antifungal meds |
How Fast Do Columnaris Symptoms Appear?
- Acute form: Symptoms appear and worsen within 24–48 hours. Fish may die suddenly.
- Chronic form: Symptoms develop slowly over days to weeks, with intermittent flare-ups.
The speed depends on water conditions, fish health, and bacterial load.
Fish Species Most Affected by Columnaris Symptoms
While all freshwater fish are at risk, some are more vulnerable:
- Guppies (hence “Guppy Disease”)
- Catfish (especially Corydoras & Plecos – often show gill damage)
- Angelfish
- Livebearers (Mollies, Platies, Swordtails)
- Rainbowfish
- Goldfish
Catfish are especially sensitive to salt and medications, making treatment trickier.
How to Respond When You Notice Symptoms
Recognizing Columnaris symptoms is only half the battle. Acting fast is critical.
- Quarantine Sick Fish – Prevent spread to healthy tankmates.
- Lower Temperature – Columnaris thrives in warmth. Reduce to 72–75°F (22–24°C).
- Improve Water Quality – Perform partial water change, remove waste.
- Start Treatment Immediately – Use appropriate antibiotics (Kanamycin, Furan-2, or Oxytetracycline).
- Disinfect Equipment – Clean nets, siphons, and decorations to stop reinfection.
Why Early Symptom Recognition Matters
Columnaris can kill fish very quickly. Early detection allows:
- More effective treatment response
- Reduced mortality rate
- Prevention of spread to the entire tank
Ignoring early signs (like white patches or fin fraying) often leads to mass die-offs.
Long-Term Effects of Columnaris
Even if fish survive, Columnaris symptoms may cause:
- Permanent fin or gill damage
- Increased vulnerability to future infections
- Reduced breeding ability
- Stunted growth in young fish
This is why prevention and early treatment are so important.
Preventing Columnaris Symptoms in Fish

The best way to fight Columnaris is to stop it before it starts.
1. Maintain Excellent Water Quality
- Weekly 25% water changes
- Keep ammonia/nitrite at 0 ppm
- Nitrate under 20 ppm
- Strong aeration for oxygen supply
2. Quarantine New Fish
- Isolate for 2–3 weeks before adding to main tank
- Prevents introducing bacteria
3. Reduce Stress
- Avoid overcrowding
- Provide hiding spots
- Keep stable temperature and pH
4. Clean Equipment
- Disinfect nets, siphons, and decorations
- Avoid cross-contamination between tanks
5. Strengthen Immunity
- Feed high-quality diet
- Add vitamin supplements or garlic-based foods
Final Thoughts
Recognizing Columnaris symptoms in fish is vital for every aquarist. This deadly bacterial infection often masquerades as fungus but progresses much faster and requires different treatment.
The key symptoms include:
- White/gray patches on skin and mouth
- Saddleback lesion across the back
- Cotton mouth appearance
- Frayed fins
- Gill damage and labored breathing
Early detection, quarantine, and rapid treatment with the right antibiotics can save your fish. Prevention, however, remains the best defense—clean water, stable conditions, and strong immunity are your strongest weapons against Columnaris.
FAQs About Columnaris Symptoms in Fish
Q1: What are the first signs of Columnaris disease?
The earliest signs include white or gray patches on the mouth, fins, or body and frayed fin edges. A saddleback lesion is a classic indicator.
Q2: How is Columnaris different from fungus?
Columnaris looks like fungus but is bacterial. Fungus is fluffy and grows slower, while Columnaris is flat, fast-spreading, and deadly.
Q3: Can Columnaris kill fish without showing symptoms?
Yes. In acute cases, fish may die from gill damage before external symptoms appear.
Q4: Which fish species show Columnaris symptoms most often?
Guppies, catfish, livebearers, rainbowfish, and goldfish are highly susceptible.
Q5: How fast do Columnaris symptoms progress?
In acute cases, symptoms worsen within 24–48 hours. Chronic cases may take weeks to show fully.
Q6: Do all fish in the tank show symptoms at once?
Not always. Some fish may carry the bacteria without visible symptoms, but they can still spread it.
Q7: Can Columnaris symptoms go away without treatment?
No. Columnaris requires treatment. Without intervention, symptoms worsen until death.
Q8: Do Columnaris symptoms return after treatment?
Yes, if water quality remains poor or stress continues, Columnaris can return.
Q9: Are Columnaris symptoms contagious across tanks?
Yes. Contaminated nets, siphons, or even splashed water can spread bacteria between tanks.
Q10: Is Columnaris harmful to humans?
No. Columnaris only affects fish and poses no risk to humans.